STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_2129Polysaccharide biosynthesis/export family protein. (452 aa)    
Predicted Functional Partners:
AKL17_1256
Succinoglycan biosynthesis transport protein ExoP, putative.
 
 
 0.995
AKL17_3000
Polysaccharide biosynthesis/export family protein.
  
  
 
0.912
AKL17_2132
Hypothetical protein.
 
  
 0.788
AKL17_0282
Capsule polysaccharide export protein.
  
  
 0.771
AKL17_2131
Lipoprotein.
 
     0.761
AKL17_0281
ABC polysaccharide export transporter, inner membrane subunit.
 
  
 0.757
AKL17_2133
Metallophosphoesterase.
 
    0.736
AKL17_3325
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.736
AKL17_3001
Capsular polysaccharide export protein KpsC.
  
  
 0.725
AKL17_0286
Nucleotide sugar epimerase/dehydratase.
  
  
 0.649
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.