STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_2765Penicillin amidase. (825 aa)    
Predicted Functional Partners:
AKL17_3460
Hypothetical protein.
  
     0.630
AKL17_2764
2-hydroxy-3-oxopropionate reductase.
       0.608
AKL17_2028
Hypothetical protein.
  
     0.531
mrdB
Rod shape-determining protein MreD; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
     0.510
AKL17_0321
Hypothetical protein.
  
     0.495
AKL17_0705
Hypothetical protein.
  
     0.456
AKL17_0140
Hypothetical protein.
  
     0.434
AKL17_4716
Putative acetyl transferase.
  
     0.428
AKL17_1823
Hypothetical protein.
  
     0.422
AKL17_2402
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
      
 0.414
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.