STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3099Short chain dehydrogenase. (260 aa)    
Predicted Functional Partners:
AKL17_3100
Hypothetical protein.
 
    0.821
AKL17_3097
3-alpha,7-alpha,12-alpha-trihydroxy-5-beta- cholest-24-enoyl-CoA hydratase.
 
 0.819
AKL17_3098
Oxidoreductase, molybdopterin-binding; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.780
AKL17_3877
Putative oxidoreductase.
  
     0.730
AKL17_2210
Short-chain dehydrogenase/reductase SDR.
  
     0.708
AKL17_2452
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.695
AKL17_3095
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase.
  
 0.616
AKL17_3096
3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.589
AKL17_3041
Efflux ABC transporter, transmembrane ATP-binding protein.
 
 
 0.503
AKL17_1296
Sulfatase.
   
 
 0.486
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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