STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3297Tripartite ATP-independent periplasmic transporter DctQ. (174 aa)    
Predicted Functional Partners:
AKL17_3296
TRAP dicarboxylate transporter-DctM subunit.
 
 0.996
AKL17_3298
TRAP dicarboxylate transporter, DctP subunit.
 
 
 0.993
AKL17_3294
TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.806
AKL17_0653
TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.788
AKL17_3293
TRAP dicarboxylate transporter subunit DctM.
 
 
 0.771
AKL17_3880
TRAP dicarboxylate transporter subunit DctM.
 
 
 0.761
AKL17_0655
DctM9.
 
 
 0.750
AKL17_3882
TRAP dicarboxylate transporter-DctP subunit.
 
  
 0.724
AKL17_3283
TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.709
AKL17_3280
TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.680
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.