STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3413Lipid ABC transporter ATPase/inner membrane protein. (605 aa)    
Predicted Functional Partners:
AKL17_0097
ABC-type spermidine/putrescine transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
 
   
0.900
AKL17_3922
Type I secretion system ATPase.
 
      0.890
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.579
AKL17_2312
ABC transporter, fused ATPase and inner membrane subunits.
  
 
0.548
AKL17_3412
long-chain-fatty-acid--CoA ligase.
    
 0.523
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
  
 0.486
AKL17_3997
ABC transporter, nucleotide binding/ATPase protein.
 
0.479
AKL17_3921
Type I secretion system ATPase.
 
0.472
AKL17_2540
ABC transporter-related.
  
0.470
AKL17_3958
AAA ATPase.
   
 0.458
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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