STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3528Hypothetical protein. (61 aa)    
Predicted Functional Partners:
AKL17_3531
Flp pilus assembly protein CpaB.
 
  
 0.945
AKL17_3534
PP-loop family ATPase.
 
  
 0.915
AKL17_3540
Peptidase A24A prepilin type IV.
 
  
 0.905
AKL17_2748
Hypothetical protein.
 
  
 0.871
AKL17_2747
Hypothetical protein.
 
  
 0.867
AKL17_3532
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.865
AKL17_3536
Type II secretion system protein.
 
  
 0.840
AKL17_3538
Hypothetical protein.
 
  
 0.821
AKL17_3539
Hypothetical protein.
 
  
 0.820
AKL17_3542
ATPase.
 
    0.780
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.