STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3566Rhiziobicin secretion. (209 aa)    
Predicted Functional Partners:
AKL17_3565
Type I secretion system ATPase.
 
  
  0.984
AKL17_3922
Type I secretion system ATPase.
 
  
  0.984
AKL17_3567
Hemolysin D.
  
 0.955
AKL17_3081
Putative dipeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.909
AKL17_1291
ABC alpha-glucoside transporter, ATPase subunit AglK; Belongs to the ABC transporter superfamily.
 
    
0.904
AKL17_2041
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.904
AKL17_2058
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
    
0.904
phnC-2
Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
    
0.904
AKL17_4273
Iron-chelate-transporting ATPase.
 
    
0.904
AKL17_2264
AABC amino acid transporter, ATPase subunit.
 
     
0.900
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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