STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3660Conjugal transfer protein TrbB. (93 aa)    
Predicted Functional Partners:
AKL17_3661
Conjugal transfer protein TrbC.
   
 0.954
AKL17_3658
Conjugal transfer protein TrbJ.
 
   
 0.950
AKL17_3659
Conjugal transfer ATPase TrbE.
 
   
 0.950
AKL17_3655
Conjugal transfer protein TrbF.
 
   
 0.946
AKL17_3656
Conjugal transfer protein TrbL.
 
   
 0.945
AKL17_3654
P-type conjugative transfer protein TrbG.
 
   
 0.943
AKL17_3653
Conjugation TrbI family protein.
 
   
 0.940
AKL17_3662
P-type conjugative transfer ATPase TrbB.
 
   
 0.934
AKL17_3652
Hypothetical protein.
 
     0.909
AKL17_0494
Conjugal transfer protein TrbC.
   
 0.809
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.