STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3769Putative high-affinity branched-chain amino acid transport ATP-binding protein. (245 aa)    
Predicted Functional Partners:
AKL17_3768
Putative high-affinity branched-chain amino acid transport system; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
AKL17_3766
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
AKL17_3765
Putative aliphatic amidase expression-regulating protein.
 
  
 0.978
AKL17_3770
Branched-chain amino acid transport system ATP-binding protein.
 
 
0.968
AKL17_2928
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.967
AKL17_1259
Branched-chain amino acid ABC superfamily ATP binding cassette transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.948
AKL17_2926
ABC transporter-related.
  
0.920
AKL17_4409
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.909
AKL17_4160
Branched-chain amino acid ABC transporter ATP-binding protein LivF.
  
0.892
AKL17_1261
ABC branched-chain amino acid transporters, ATPase component.
  
0.856
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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