STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3869ABC-type transport system periplasmic substrate-binding protein. (523 aa)    
Predicted Functional Partners:
AKL17_3870
ABC-type transport system permease protein.
 
 0.956
AKL17_3871
Oligopeptide ABC transporter permease protein.
 
 0.950
AKL17_3872
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.860
AKL17_3873
Putative oligopeptide ABC transporter ATP-binding protein.
  
 0.826
AKL17_3756
Oligopeptide ABC transpoter oligopeptide-binding protein.
  
  
  0.775
AKL17_3867
IclR family transcriptional regulator.
 
     0.764
AKL17_0720
ABC dipeptide transporter, inner membrane subunit DppC.
 
 0.763
AKL17_0721
ABC dipeptide transporter, inner membrane subunit DppB.
 
 
 0.749
AKL17_3083
ABC transporter permease.
 
 0.747
AKL17_0007
ABC transporter, membrane spanning protein.
 
 0.731
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.