STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3871Oligopeptide ABC transporter permease protein. (296 aa)    
Predicted Functional Partners:
AKL17_3872
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.996
AKL17_3873
Putative oligopeptide ABC transporter ATP-binding protein.
  
 0.993
AKL17_0719
ABC dipeptide transporter, ATPase subunit DppD.
  
 0.983
AKL17_1619
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
  
 0.983
AKL17_3082
Putative dipeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.983
AKL17_0718
ABC dipeptide transporter, ATPase subunit DppF.
  
 0.971
AKL17_1620
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
  
 0.969
AKL17_3870
ABC-type transport system permease protein.
  
 0.967
AKL17_1002
Oligopeptide ABC transporter; Belongs to the ABC transporter superfamily.
  
 0.954
AKL17_3869
ABC-type transport system periplasmic substrate-binding protein.
 
 0.950
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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