STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_4025Hypothetical protein. (161 aa)    
Predicted Functional Partners:
AKL17_4024
Conjugal transfer protein precursor.
 
     0.948
AKL17_4026
Hypothetical protein.
 
     0.941
AKL17_4029
Replication protein A.
 
     0.941
AKL17_4023
Hypothetical protein.
 
     0.903
AKL17_4030
Putative transcriptional regulator.
 
     0.891
AKL17_4028
Cobyrinic acid ac-diamide synthase.
 
     0.871
AKL17_4021
Hypothetical protein.
 
     0.844
AKL17_4019
Hypothetical protein.
 
     0.832
AKL17_4032
Hypothetical protein.
 
     0.813
AKL17_3673
Phage transcriptional regulator, AlpA.
 
     0.789
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.