STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_4167Sensor histidine kinase/response regulator receiver protein. (549 aa)    
Predicted Functional Partners:
AKL17_0682
Hybrid histidine kinase.
 
      0.862
AKL17_1976
Na /solute symporter.
 
 
 0.847
AKL17_4169
Two component transcriptional regulator.
 
 
 0.841
AKL17_4166
AMP-dependent synthetase and ligase.
 
     0.724
AKL17_2750
TetR family transcriptional regulator.
  
   
 0.610
AKL17_4168
PAS/PAC sensor hybrid histidine kinase.
       0.594
AKL17_1269
Two-component hybrid sensor and regulator.
  
 
 0.580
AKL17_4165
Branched-chain amino acid ABC transporter ATP-binding protein LivG.
 
     0.568
AKL17_4159
phenylacetate--CoA ligase.
 
     0.553
AKL17_4161
ABC branched amino acid transporter family, periplasmic substrate-binding subunit.
 
     0.552
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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