STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_4186Lipoprotein. (181 aa)    
Predicted Functional Partners:
AKL17_1342
Lipoprotein.
  
     0.773
AKL17_4639
Hypothetical protein.
  
     0.765
AKL17_0747
Hypothetical protein.
  
     0.758
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
     
 0.751
AKL17_0150
Hypothetical protein.
  
     0.748
AKL17_1720
Hypothetical protein.
  
     0.745
AKL17_3434
Hypothetical protein.
  
     0.744
AKL17_4640
Hypothetical protein.
  
     0.740
AKL17_4184
Peptidase M16 protein.
       0.725
AKL17_4185
Peptidase M16 domain-containing protein; Belongs to the peptidase M16 family.
       0.725
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.