STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_4273Iron-chelate-transporting ATPase. (274 aa)    
Predicted Functional Partners:
AKL17_4270
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.948
AKL17_4269
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.944
AKL17_3566
Rhiziobicin secretion.
 
    
0.904
AKL17_0836
ABC transporter-related.
  
0.899
AKL17_0842
Fe3 -siderophore ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.899
AKL17_1500
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.897
AKL17_1501
Transport system permease protein.
 
 
 0.891
AKL17_0843
Periplasmic binding protein.
 
 
 0.890
AKL17_2173
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.889
AKL17_3855
Iron siderophore/cobalamin ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.882
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.