STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacProtein involved in serine-type D-Ala-D-Ala carboxypeptidase activity; Belongs to the peptidase S11 family. (421 aa)    
Predicted Functional Partners:
WDC_0350
Multimodular transpeptidase-transglycosylase, Penicillin-binding protein 1A/1B; Protein involved in peptidoglycan glycosyltransferase activity.
  
 
 0.959
WDC_1733
Multimodular transpeptidase-transglycosylase; Protein involved in peptidoglycan glycosyltransferase activity.
   
 
 0.952
ftsI-2
Cell division protein FtsI, Peptidoglycan synthetase.
 
 
 0.925
dac-2
Protein involved in serine-type D-Ala-D-Ala carboxypeptidase activity.
     
 0.910
lys-2
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.832
WDC_0071
Sensor histidine kinase.
  
  
 0.828
pat
Phosphinothricin N-acetyltransferase.
    
  0.783
ftsI
Cell division protein, Peptidoglycan synthetase.
  
 
 0.583
prkC
Serine/threonine protein kinase PrkC; Regulator of stationary phase.
   
 
 0.561
WDC_1353
Cell wall-associated hydrolase with LysM domains.
  
 
 0.484
Your Current Organism:
Lactobacillus wasatchensis
NCBI taxonomy Id: 1335616
Other names: DSM 29958, L. wasatchensis, LMG 28678, LMG:28678, Lactobacillus sp. WDC04, Lactobacillus wasatchensis Oberg et al. 2016, strain WDC04
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.