STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDC_0403Integral membrane protein. (290 aa)    
Predicted Functional Partners:
ldhD
Protein involved in D-lactate dehydrogenase activity; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.644
aspAT1
Protein involved in L-aspartate:2-oxoglutarate aminotransferase activity.
       0.570
WDC_0643
Hypothetical protein.
  
     0.499
htrA
Serine protease, DegP/HtrA, do-like; Protein involved in serine-type endopeptidase activity, protein binding and proteolysis.
    
 
 0.492
htrA-2
Serine protease HtrA; Protein involved in serine-type endopeptidase activity, protein binding and proteolysis.
    
 
 0.492
WDC_0406
Amino acid ABC transporter, amino acid-binding/permease protein.
  
  
 0.447
WDC_0407
Amino acid ABC transporter, amino acid-binding/permease protein; Belongs to the bacterial solute-binding protein 3 family.
  
  
 0.404
WDC_1520
Purine transport regulator.
  
     0.404
WDC_1268
Hypothetical protein.
  
     0.400
Your Current Organism:
Lactobacillus wasatchensis
NCBI taxonomy Id: 1335616
Other names: DSM 29958, L. wasatchensis, LMG 28678, LMG:28678, Lactobacillus sp. WDC04, Lactobacillus wasatchensis Oberg et al. 2016, strain WDC04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.