STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDC_0535Hypothetical protein. (104 aa)    
Predicted Functional Partners:
WDC_0663
Hypothetical protein.
  
     0.772
WDC_0804
Hypothetical protein.
  
     0.767
WDC_0737
Hypothetical protein.
  
     0.748
WDC_1013
Hypothetical protein.
  
     0.735
WDC_0736
Transcriptional regulator, xre family.
  
     0.707
WDC_1781
ysoA like protein.
  
     0.656
WDC_0725
Membrane-associated phospholipid phosphatase.
  
     0.638
WDC_0939
Hypothetical protein.
  
     0.636
WDC_0204
Hypothetical protein.
  
     0.623
WDC_0533
Hypothetical protein.
       0.596
Your Current Organism:
Lactobacillus wasatchensis
NCBI taxonomy Id: 1335616
Other names: DSM 29958, L. wasatchensis, LMG 28678, LMG:28678, Lactobacillus sp. WDC04, Lactobacillus wasatchensis Oberg et al. 2016, strain WDC04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.