STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDC_0646Hypothetical protein. (228 aa)    
Predicted Functional Partners:
WDC_0645
L-fucose isomerase like protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
   
 0.951
WDC_0648
Melibiose carrier protein, Na+/melibiose symporter.
 
    0.865
fsa
Transaldolase; Protein involved in sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity.
 
    0.842
WDC_0650
Glycosidase like protein; Belongs to the glycosyl hydrolase 31 family.
 
    0.810
gabD
Protein involved in succinate-semialdehyde dehydrogenase (NAD+) activity and succinate-semialdehyde dehydrogenase [NAD(P)+] activity; Belongs to the aldehyde dehydrogenase family.
 
     0.697
gntK
Gluconokinase; Protein involved in gluconokinase activity; Belongs to the FGGY kinase family.
 
    0.598
WDC_1031
Gluconokinase; Protein involved in gluconokinase activity; Belongs to the FGGY kinase family.
 
    0.560
Your Current Organism:
Lactobacillus wasatchensis
NCBI taxonomy Id: 1335616
Other names: DSM 29958, L. wasatchensis, LMG 28678, LMG:28678, Lactobacillus sp. WDC04, Lactobacillus wasatchensis Oberg et al. 2016, strain WDC04
Server load: low (22%) [HD]