STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDC_0851Protein involved in alcohol dehydrogenase (NAD) activity. (373 aa)    
Predicted Functional Partners:
WDC_1006
Alcohol dehydrogenase; Acetaldehyde dehydrogenase; Protein involved in alcohol dehydrogenase (NAD) activity and acetaldehyde dehydrogenase (acetylating) activity; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.973
WDC_1660
Protein involved in alcohol dehydrogenase (NAD) activity.
  
 
 0.852
dhaT
1,3-propanediol dehydrogenase.
   
 0.850
adh
Protein involved in alcohol dehydrogenase (NAD) activity.
  
 
0.807
tadA
tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.661
argG
Protein involved in argininosuccinate synthase activity; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
    
 0.564
gatA
Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
     
 0.531
gabD-2
Protein involved in succinate-semialdehyde dehydrogenase (NAD+) activity and succinate-semialdehyde dehydrogenase [NAD(P)+] activity.
 
 0.491
araC
Transcriptional regulator of rhamnose utilization, AraC family; Protein involved in sequence-specific DNA binding transcription factor activity and sequence-specific DNA binding.
 
   
 0.491
gabD
Protein involved in succinate-semialdehyde dehydrogenase (NAD+) activity and succinate-semialdehyde dehydrogenase [NAD(P)+] activity; Belongs to the aldehyde dehydrogenase family.
 
 0.485
Your Current Organism:
Lactobacillus wasatchensis
NCBI taxonomy Id: 1335616
Other names: DSM 29958, L. wasatchensis, LMG 28678, LMG:28678, Lactobacillus sp. WDC04, Lactobacillus wasatchensis Oberg et al. 2016, strain WDC04
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