STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDC_1122Hypothetical protein. (115 aa)    
Predicted Functional Partners:
WDC_1097
PTS system, N-acetylglucosamine-specific; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity.
   
 
 0.894
WDC_1120
PTS system, galactitol-specific IIC component; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity.
  
 
 0.862
WDC_1119
PTS system, galactitol-specific IIB component; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity.
  
 
 0.858
WDC_1121
PTS system, galactitol-specific IIA component; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity.
       0.773
bglG
Transcriptional antiterminator of lichenan operon, BglG family; Protein involved in sugar:hydrogen symporter activity and phosphoenolpyruvate-dependent sugar phosphotransferase system.
  
 
 0.688
uxuB
D-mannonate oxidoreductase; Protein involved in fructuronate reductase activity.
  
 
 0.496
WDC_0454
ATP-binding like protein; Displays ATPase and GTPase activities.
  
  
 0.491
WDC_1706
Phosphocarrier protein of PTS system; Protein involved in sugar:hydrogen symporter activity and phosphoenolpyruvate-dependent sugar phosphotransferase system.
  
 
 0.452
WDC_1737
PTS system, mannose-specific IIA component; Protein involved in protein-N(PI)-phosphohistidine-sugar phosphotransferase activity.
  
 
 0.430
WDC_1705
Phosphoenolpyruvate-protein phosphotransferase of PTS system; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
    
 0.420
Your Current Organism:
Lactobacillus wasatchensis
NCBI taxonomy Id: 1335616
Other names: DSM 29958, L. wasatchensis, LMG 28678, LMG:28678, Lactobacillus sp. WDC04, Lactobacillus wasatchensis Oberg et al. 2016, strain WDC04
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