STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDC_1746Protein involved in poly(glycerol-phosphate) alpha-glucosyltransferase activity. (217 aa)    
Predicted Functional Partners:
WDC_1747
Protein involved in poly(glycerol-phosphate) alpha-glucosyltransferase activity.
 
     0.943
WDC_0218
Cell surface hydrolase, membrane-bound.
    
   0.598
WDC_0734
Hydrolase of the alpha/beta superfamily.
    
   0.598
WDC_1101
Cell surface hydrolase like protein.
    
   0.598
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.500
WDC_1575
Phosphoesterase.
  
     0.477
recQ
ATP-dependent DNA helicase RecQ; Protein involved in nucleic acid binding, helicase activity, ATP binding and ATP-dependent helicase activity.
    
   0.471
recS
ATP-dependent DNA helicase RecS.
    
   0.471
glf
Protein involved in UDP-galactopyranose mutase activity.
  
 
 0.470
pnuC
Nicotinamide mononucleotide transporter PnuC, NrdR-regulated.
  
     0.462
Your Current Organism:
Lactobacillus wasatchensis
NCBI taxonomy Id: 1335616
Other names: DSM 29958, L. wasatchensis, LMG 28678, LMG:28678, Lactobacillus sp. WDC04, Lactobacillus wasatchensis Oberg et al. 2016, strain WDC04
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.