STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000412635_02742Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_000412635_02741
Unannotated protein.
 
 
 0.999
GCA_000412635_01480
Unannotated protein.
 
 
 0.992
GCA_000412635_02743
Unannotated protein.
       0.647
GCA_000412635_02744
Unannotated protein.
     
 0.601
GCA_000412635_00164
Unannotated protein.
 
   
 0.558
GCA_000412635_01395
Unannotated protein.
 
   
 0.516
GCA_000412635_02056
Unannotated protein.
    
  0.495
GCA_000412635_01840
Unannotated protein.
     
 0.471
GCA_000412635_00124
Unannotated protein.
     
 0.457
GCA_000412635_00197
Unannotated protein.
    
  0.456
Your Current Organism:
Sphingobium sp. YL23
NCBI taxonomy Id: 1335760
Other names: S. sp. YL23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.