STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518805_00614Unannotated protein. (368 aa)    
Predicted Functional Partners:
GCA_000518805_01503
Unannotated protein.
 
     0.651
GCA_000518805_01504
Unannotated protein.
 
     0.605
GCA_000518805_00615
Unannotated protein.
       0.592
GCA_000518805_01506
Unannotated protein.
 
   
 0.563
GCA_000518805_00612
Unannotated protein.
  
    0.538
GCA_000518805_01969
Unannotated protein.
 
     0.518
GCA_000518805_01505
Unannotated protein.
 
     0.504
GCA_000518805_00613
Unannotated protein.
  
    0.485
GCA_000518805_02249
Unannotated protein.
 
     0.484
GCA_000518805_00342
Unannotated protein.
 
    0.449
Your Current Organism:
Shewanella waksmanii
NCBI taxonomy Id: 1336233
Other names: S. waksmanii ATCC BAA-643, Shewanella waksmanii ATCC BAA-643
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.