STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526675_00450Unannotated protein. (317 aa)    
Predicted Functional Partners:
GCA_000526675_00449
Unannotated protein.
  
 0.988
GCA_000526675_00452
Unannotated protein.
  
 0.895
GCA_000526675_00058
Unannotated protein.
    
 
 0.828
GCA_000526675_00915
Unannotated protein.
  
 
 0.819
GCA_000526675_00885
Unannotated protein.
   
 
 0.810
GCA_000526675_00927
Unannotated protein.
    
 
 0.800
GCA_000526675_00921
Unannotated protein.
   
 
 0.797
GCA_000526675_00890
Unannotated protein.
  
 
 0.792
GCA_000526675_00886
Unannotated protein.
   
 
 0.790
GCA_000526675_00908
Unannotated protein.
    
 
 0.788
Your Current Organism:
Atopobacter phocae
NCBI taxonomy Id: 1336234
Other names: A. phocae ATCC BAA-285, Atopobacter phocae ATCC BAA-285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.