STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526675_00778Unannotated protein. (278 aa)    
Predicted Functional Partners:
GCA_000526675_00710
Unannotated protein.
   
 0.977
GCA_000526675_00779
Unannotated protein.
 
 0.973
GCA_000526675_01181
Unannotated protein.
     
 0.953
GCA_000526675_01186
Unannotated protein.
     
 0.953
GCA_000526675_01477
Unannotated protein.
     
 0.953
GCA_000526675_01478
Unannotated protein.
     
 0.953
GCA_000526675_00792
Unannotated protein.
   
 0.951
GCA_000526675_00349
Unannotated protein.
   
 0.945
GCA_000526675_00780
Unannotated protein.
 
  
 0.942
GCA_000526675_00476
Unannotated protein.
  
 0.917
Your Current Organism:
Atopobacter phocae
NCBI taxonomy Id: 1336234
Other names: A. phocae ATCC BAA-285, Atopobacter phocae ATCC BAA-285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.