STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526675_01154Unannotated protein. (455 aa)    
Predicted Functional Partners:
GCA_000526675_00031
Unannotated protein.
 
 0.988
GCA_000526675_00030
Unannotated protein.
 
 0.984
GCA_000526675_00029
Unannotated protein.
 
 
 0.943
GCA_000526675_00802
Unannotated protein.
  
 
 0.877
GCA_000526675_00422
Unannotated protein.
    
 0.865
GCA_000526675_01227
Unannotated protein.
     
 0.860
GCA_000526675_00734
Unannotated protein.
   
 0.798
GCA_000526675_00677
Unannotated protein.
    
 0.763
GCA_000526675_00661
Unannotated protein.
    
 0.693
GCA_000526675_00089
Unannotated protein.
   
 0.658
Your Current Organism:
Atopobacter phocae
NCBI taxonomy Id: 1336234
Other names: A. phocae ATCC BAA-285, Atopobacter phocae ATCC BAA-285
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.