STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518745_00170Unannotated protein. (495 aa)    
Predicted Functional Partners:
GCA_000518745_02153
Unannotated protein.
 
 
   0.777
GCA_000518745_01228
Unannotated protein.
  
  
  0.776
GCA_000518745_00862
Unannotated protein.
  
  
 
0.745
GCA_000518745_01019
Unannotated protein.
  
 
  0.671
GCA_000518745_01005
Unannotated protein.
  
 
  0.664
GCA_000518745_02186
Unannotated protein.
  
 
  0.664
GCA_000518745_00922
Unannotated protein.
     
  0.657
GCA_000518745_01641
Unannotated protein.
     
  0.657
GCA_000518745_02098
Unannotated protein.
     
  0.657
GCA_000518745_01160
Unannotated protein.
  
  
 
0.654
Your Current Organism:
Phaseolibacter flectens
NCBI taxonomy Id: 1336237
Other names: P. flectens ATCC 12775, Phaseolibacter flectens ATCC 12775, Pseudomonas flectens ATCC 12775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.