STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518745_02291Unannotated protein. (195 aa)    
Predicted Functional Partners:
GCA_000518745_01810
Unannotated protein.
  
 0.998
GCA_000518745_02408
Unannotated protein.
 
 0.993
GCA_000518745_01981
Unannotated protein.
    
 0.917
GCA_000518745_00786
Unannotated protein.
  
 
 0.826
GCA_000518745_01361
Unannotated protein.
    
 0.789
GCA_000518745_01600
Unannotated protein.
 
  
 0.622
GCA_000518745_02290
Unannotated protein.
       0.557
GCA_000518745_02340
Unannotated protein.
   
   0.550
GCA_000518745_00747
Unannotated protein.
     
 0.535
GCA_000518745_02292
Unannotated protein.
       0.532
Your Current Organism:
Phaseolibacter flectens
NCBI taxonomy Id: 1336237
Other names: P. flectens ATCC 12775, Phaseolibacter flectens ATCC 12775, Pseudomonas flectens ATCC 12775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.