STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518685_00167Unannotated protein. (680 aa)    
Predicted Functional Partners:
GCA_000518685_01344
Unannotated protein.
  
 
 0.932
GCA_000518685_01495
Unannotated protein.
    
 0.871
GCA_000518685_00168
Unannotated protein.
  
  
 0.700
GCA_000518685_00169
Unannotated protein.
       0.689
GCA_000518685_01460
Unannotated protein.
  
 
 0.624
GCA_000518685_01780
Unannotated protein.
   
 
 0.563
GCA_000518685_00437
Unannotated protein.
     
 0.511
GCA_000518685_02101
Unannotated protein.
     
 0.488
GCA_000518685_01586
Unannotated protein.
   
 
 0.459
GCA_000518685_00287
Unannotated protein.
  
 
 0.433
Your Current Organism:
Eubacterium xylanophilum
NCBI taxonomy Id: 1336241
Other names: E. xylanophilum ATCC 35991, Eubacterium xylanophilum ATCC 35991
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.