STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518685_01484Unannotated protein. (166 aa)    
Predicted Functional Partners:
GCA_000518685_01795
Unannotated protein.
  
 
 0.912
GCA_000518685_00630
Unannotated protein.
   
 
 0.856
GCA_000518685_01794
Unannotated protein.
   
 
 0.853
GCA_000518685_00180
Unannotated protein.
   
 
 0.852
GCA_000518685_01483
Unannotated protein.
  
    0.776
GCA_000518685_01482
Unannotated protein.
       0.737
GCA_000518685_01481
Unannotated protein.
       0.674
GCA_000518685_01480
Unannotated protein.
       0.645
GCA_000518685_00693
Unannotated protein.
   
    0.603
GCA_000518685_01485
Unannotated protein.
 
     0.578
Your Current Organism:
Eubacterium xylanophilum
NCBI taxonomy Id: 1336241
Other names: E. xylanophilum ATCC 35991, Eubacterium xylanophilum ATCC 35991
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.