STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000518665_01291Unannotated protein. (165 aa)    
Predicted Functional Partners:
GCA_000518665_01290
Unannotated protein.
       0.776
GCA_000518665_00399
Unannotated protein.
    
  0.676
GCA_000518665_02793
Unannotated protein.
    
  0.666
GCA_000518665_02606
Unannotated protein.
    
  0.664
GCA_000518665_00402
Unannotated protein.
    
  0.662
GCA_000518665_02709
Unannotated protein.
    
  0.662
GCA_000518665_01292
Unannotated protein.
       0.639
GCA_000518665_03355
Unannotated protein.
    
  0.428
Your Current Organism:
Microvirga flocculans
NCBI taxonomy Id: 1336243
Other names: Balneimonas flocculans ATCC BAA-817, M. flocculans ATCC BAA-817, Microvirga flocculans ATCC BAA-817, Microvirga flocculans TFB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.