STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526695_00184Unannotated protein. (182 aa)    
Predicted Functional Partners:
GCA_000526695_00183
Unannotated protein.
     0.987
GCA_000526695_02106
Unannotated protein.
  
     0.674
GCA_000526695_02220
Unannotated protein.
  
     0.666
GCA_000526695_01821
Unannotated protein.
  
     0.652
GCA_000526695_01621
Unannotated protein.
  
     0.651
GCA_000526695_01265
Unannotated protein.
  
     0.572
GCA_000526695_00449
Unannotated protein.
 
     0.539
GCA_000526695_01256
Unannotated protein.
 
     0.499
GCA_000526695_01227
Unannotated protein.
  
     0.475
Your Current Organism:
Carnimonas nigrificans
NCBI taxonomy Id: 1336245
Other names: C. nigrificans ATCC BAA-78, Carnimonas nigrificans ATCC BAA-78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.