STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598255_02747annotation not available (718 aa)    
Predicted Functional Partners:
GCA_001598255_02005
annotation not available
 
 0.922
GCA_001598255_04800
annotation not available
 
 
 0.889
GCA_001598255_01323
annotation not available
 
 0.883
GCA_001598255_00562
annotation not available
 
 0.866
GCA_001598255_03842
annotation not available
  
 0.843
GCA_001598255_04170
annotation not available
  
 0.843
GCA_001598255_02746
annotation not available
 
    
0.833
GCA_001598255_00020
annotation not available
  
 
 0.831
GCA_001598255_02584
annotation not available
  
 
 0.807
GCA_001598255_01702
annotation not available
  
 
 0.792
Your Current Organism:
Mitsuaria chitosanitabida
NCBI taxonomy Id: 1336246
Other names: M. chitosanitabida ATCC BAA-476 = NBRC 102408, Mitsuaria chitosanitabida ATCC BAA-476, Mitsuaria chitosanitabida ATCC BAA-476 = NBRC 102408, Mitsuaria chitosanitabida NBRC 102408, Mitsuaria chitosanitabida NBRC 102408 = ATCC BAA-476
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.