STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598255_04730annotation not available (351 aa)    
Predicted Functional Partners:
GCA_001598255_02957
annotation not available
    
  0.657
GCA_001598255_04729
annotation not available
       0.566
GCA_001598255_03246
annotation not available
  
     0.540
GCA_001598255_03664
annotation not available
  
     0.424
GCA_001598255_00926
annotation not available
  
     0.408
GCA_001598255_04728
annotation not available
       0.408
GCA_001598255_03295
annotation not available
  
     0.400
Your Current Organism:
Mitsuaria chitosanitabida
NCBI taxonomy Id: 1336246
Other names: M. chitosanitabida ATCC BAA-476 = NBRC 102408, Mitsuaria chitosanitabida ATCC BAA-476, Mitsuaria chitosanitabida ATCC BAA-476 = NBRC 102408, Mitsuaria chitosanitabida NBRC 102408, Mitsuaria chitosanitabida NBRC 102408 = ATCC BAA-476
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.