STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3N4ITR6Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
A0A3N4JPB1
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.768
A0A3N4JK21
SpoU_methylase domain-containing protein.
   
 
 0.760
A0A3N4JJW3
tRNA pseudouridine synthase D.
    
 
 0.755
A0A3N4JNJ4
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.740
A0A3N4JZY4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.738
A0A3N4J057
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.735
A0A3N4K3K4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.723
A0A3N4IT69
Mitochondrial 54S ribosomal protein YmL9.
   
 
 0.722
A0A3N4IW87
Mitochondrial 54S ribosomal protein YmL19; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.722
A0A3N4KKA9
Ribosomal protein L24.
   
   0.722
Your Current Organism:
Choiromyces venosus
NCBI taxonomy Id: 1336337
Other names: C. venosus 120613-1, Choiromyces venosus 120613-1
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