STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3N4K036Velvet domain-containing protein. (697 aa)    
Predicted Functional Partners:
A0A3N4ISE7
Uncharacterized protein.
    
 0.901
A0A3N4JE64
WD40 repeat-like protein.
   
 0.701
A0A3N4JDS6
Ipi1_N domain-containing protein.
    
 0.696
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.687
A0A3N4K873
EF-hand protein; Belongs to the calmodulin family.
    
 0.678
A0A3N4JUF8
DUF1348-domain-containing protein.
    
 0.670
A0A3N4JMQ1
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.668
A0A3N4KCU2
EF-hand.
    
 0.667
A0A3N4JAS2
Ribosomal protein L2.
    
  0.655
A0A3N4JRZ5
P-loop containing nucleoside triphosphate hydrolase protein.
   
  0.652
Your Current Organism:
Choiromyces venosus
NCBI taxonomy Id: 1336337
Other names: C. venosus 120613-1, Choiromyces venosus 120613-1
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