STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS03104.1Hypothetical protein. (794 aa)    
Predicted Functional Partners:
SDS03055.1
Protein of unknown function.
 
    0.746
SDS03144.1
Hypothetical protein.
       0.700
SDR98003.1
Protein of unknown function.
  
     0.624
SDR67660.1
Protein of unknown function.
  
     0.621
SDR97904.1
Protein of unknown function.
  
     0.617
SDR67632.1
Protein of unknown function.
  
     0.573
tatC
Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.554
SDS03012.1
Protein of unknown function.
 
     0.553
SDS03206.1
Protein of unknown function.
 
     0.527
SDS03338.1
Cu2+-exporting ATPase.
  
 0.518
Your Current Organism:
Gillisia sp. Hel133143
NCBI taxonomy Id: 1336796
Other names: G. sp. Hel1_33_143, Gillisia sp. Hel1_33_143
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.