STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A448YGJ6DEKNAAC100611. (613 aa)    
Predicted Functional Partners:
A0A448YI58
DEKNAAC101410.
    
 0.995
A0A448YKI5
DEKNAAC102296.
   
 0.988
A0A448YGF3
DEKNAAC100823.
    
 0.877
A0A448YG81
DEKNAAC100772.
    
 0.841
BRENAR_LOCUS35
DEKNAAC100907.
   
 0.820
A0A448YLM4
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.819
A0A448YMG3
DEKNAAC103160; Belongs to the syntaxin family.
    
 0.810
A0A448YTR1
DEKNAAC105658.
    
 0.809
A0A448YT08
DEKNAAC105215.
   
 
 0.781
A0A448YEU1
DEKNAAC100833.
   
 
 0.754
Your Current Organism:
Brettanomyces naardenensis
NCBI taxonomy Id: 13370
Other names: ATCC 22075, B. naardenensis, CBS 6042, CCRC 21520, CCRC:21520, DBVPG 6712, Dekkera naardenensis, NRRL Y-17526
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.