STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A448YHX1DEKNAAC101273. (272 aa)    
Predicted Functional Partners:
A0A448YPK1
DEKNAAC103869.
    
 0.695
A0A448YK93
DEKNAAC102631.
    
  0.686
A0A448YP10
DEKNAAC103625.
   
  0.680
A0A448YKJ7
Nucleoside diphosphate kinase.
    
 0.678
A0A448YMZ6
DEKNAAC103252.
   
  0.678
A0A448YEY9
DEKNAAC100702.
   
  0.677
A0A448YME6
DEKNAAC103008; Belongs to the universal ribosomal protein uS9 family.
    
  0.677
A0A448YS31
DEKNAAC104895.
    
  0.677
A0A448YMB4
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.676
A0A448YLC5
DEKNAAC102759.
    
  0.673
Your Current Organism:
Brettanomyces naardenensis
NCBI taxonomy Id: 13370
Other names: ATCC 22075, B. naardenensis, CBS 6042, CCRC 21520, CCRC:21520, DBVPG 6712, Dekkera naardenensis, NRRL Y-17526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.