STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A448YRH2DEKNAAC104751. (969 aa)    
Predicted Functional Partners:
A0A448YIS6
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.899
A0A448YQF9
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.897
A0A448YHF3
DEKNAAC101320.
   
 0.861
A0A448YMH6
DEKNAAC103081.
    
 0.793
A0A448YNX1
DEKNAAC103397.
    
 0.763
A0A448YQA5
DEKNAAC104233.
    
 0.763
A0A448YPF9
DEKNAAC103906.
    
 0.740
A0A448YLG5
DEKNAAC102319.
    
 0.732
A0A448YM61
DEKNAAC103022.
    
 0.732
A0A448YP29
DEKNAAC103745.
    
 0.732
Your Current Organism:
Brettanomyces naardenensis
NCBI taxonomy Id: 13370
Other names: ATCC 22075, B. naardenensis, CBS 6042, CCRC 21520, CCRC:21520, DBVPG 6712, Dekkera naardenensis, NRRL Y-17526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.