STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A448YU05DEKNAAC105672. (660 aa)    
Predicted Functional Partners:
A0A448YHX6
DEKNAAC101432.
    
 
 0.766
A0A448YNM5
DEKNAAC103444.
    
 
 0.761
A0A448YR21
DEKNAAC104522.
    
 
 0.743
A0A448YN04
DEKNAAC103268.
    
 
 0.739
A0A448YRI3
DEKNAAC104472.
    
 
 0.738
A0A448YGK0
DEKNAAC100271.
    
 
 0.592
A0A448YGH3
DEKNAAC100438.
    
 
 0.578
A0A448YSE0
DEKNAAC105071.
    
 
 0.563
A0A448YGJ0
DEKNAAC100363.
    
 
 0.561
A0A448YFI9
DEKNAAC100357.
    
 
 0.552
Your Current Organism:
Brettanomyces naardenensis
NCBI taxonomy Id: 13370
Other names: ATCC 22075, B. naardenensis, CBS 6042, CCRC 21520, CCRC:21520, DBVPG 6712, Dekkera naardenensis, NRRL Y-17526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.