node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAD54340.1 | GAD54481.1 | MBELCI_0392 | MBELCI_0533 | ATP-dependent helicase HrpB. | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.984 |
GAD54340.1 | GAD54765.1 | MBELCI_0392 | MBELCI_0817 | ATP-dependent helicase HrpB. | Ribonuclease D related protein. | 0.972 |
GAD54340.1 | rnr | MBELCI_0392 | MBELCI_0346 | ATP-dependent helicase HrpB. | 3'-to-5' exoribonuclease RNase R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.577 |
GAD54340.1 | rph | MBELCI_0392 | MBELCI_2308 | ATP-dependent helicase HrpB. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.955 |
GAD54340.1 | rpmD | MBELCI_0392 | MBELCI_1293 | ATP-dependent helicase HrpB. | LSU ribosomal protein L30p (L7e). | 0.546 |
GAD54340.1 | rpsD | MBELCI_0392 | MBELCI_1971 | ATP-dependent helicase HrpB. | SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.980 |
GAD54340.1 | rpsK | MBELCI_0392 | MBELCI_1288 | ATP-dependent helicase HrpB. | SSU ribosomal protein S11p (S14e); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.971 |
GAD54481.1 | GAD54340.1 | MBELCI_0533 | MBELCI_0392 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | ATP-dependent helicase HrpB. | 0.984 |
GAD54481.1 | GAD54765.1 | MBELCI_0533 | MBELCI_0817 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Ribonuclease D related protein. | 0.980 |
GAD54481.1 | rnr | MBELCI_0533 | MBELCI_0346 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 3'-to-5' exoribonuclease RNase R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.857 |
GAD54481.1 | rph | MBELCI_0533 | MBELCI_2308 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.964 |
GAD54481.1 | rplJ | MBELCI_0533 | MBELCI_3083 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L10p (P0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
GAD54481.1 | rplW | MBELCI_0533 | MBELCI_1153 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L23p (L23Ae); One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.998 |
GAD54481.1 | rplX | MBELCI_0533 | MBELCI_1300 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L24p (L26e); One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.998 |
GAD54481.1 | rpmD | MBELCI_0533 | MBELCI_1293 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L30p (L7e). | 0.995 |
GAD54481.1 | rpsD | MBELCI_0533 | MBELCI_1971 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
GAD54481.1 | rpsK | MBELCI_0533 | MBELCI_1288 | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S11p (S14e); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
GAD54765.1 | GAD54340.1 | MBELCI_0817 | MBELCI_0392 | Ribonuclease D related protein. | ATP-dependent helicase HrpB. | 0.972 |
GAD54765.1 | GAD54481.1 | MBELCI_0817 | MBELCI_0533 | Ribonuclease D related protein. | SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.980 |
GAD54765.1 | rnr | MBELCI_0817 | MBELCI_0346 | Ribonuclease D related protein. | 3'-to-5' exoribonuclease RNase R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.954 |