STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ83742.1LysR family transcriptional regulator, cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
SEQ83766.1
Hypothetical protein.
 
     0.640
SEQ83710.1
Aspartate kinase; Belongs to the aspartokinase family.
       0.524
SER05820.1
Glutamate synthase (ferredoxin).
     
 0.516
SER08848.1
sigma-E factor negative regulatory protein RseB.
  
     0.499
SER75966.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
  
 0.468
SER67133.1
LysR family transcriptional regulator, regulator for metE and metH; Belongs to the LysR transcriptional regulatory family.
  
     0.428
SEQ83878.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
     
 0.417
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.