STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ90478.1Predicted arabinose efflux permease, MFS family. (429 aa)    
Predicted Functional Partners:
SER54048.1
Chorismate mutase.
   
 
 0.601
SER14920.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
    
 0.558
SER26407.1
Membrane fusion protein, protease secretion system.
  
  0.551
SER51209.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
     
 0.497
SEQ89985.1
HlyD family secretion protein.
   
  0.489
SER13340.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.489
SEQ90451.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
  0.478
SEQ90506.1
Transposase, Mutator family; Required for the transposition of the insertion element.
       0.473
SEQ93998.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.470
SER64037.1
Hypothetical protein.
  
     0.438
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.