Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ90620.1 | SEQ90648.1 | SAMN05421690_100383 | SAMN05421690_100384 | Monovalent cation:H+ antiporter-2, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Nucleotide-binding universal stress protein, UspA family. | 0.639 |
SEQ90648.1 | SEQ90620.1 | SAMN05421690_100384 | SAMN05421690_100383 | Nucleotide-binding universal stress protein, UspA family. | Monovalent cation:H+ antiporter-2, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.639 |
SEQ90648.1 | SER59868.1 | SAMN05421690_100384 | SAMN05421690_104223 | Nucleotide-binding universal stress protein, UspA family. | methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.407 |
SEQ90648.1 | SER74424.1 | SAMN05421690_100384 | SAMN05421690_10646 | Nucleotide-binding universal stress protein, UspA family. | Zn-dependent amino-or carboxypeptidase, M28 family. | 0.462 |
SEQ90648.1 | flhA | SAMN05421690_100384 | SAMN05421690_100446 | Nucleotide-binding universal stress protein, UspA family. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.401 |
SEQ90648.1 | secB | SAMN05421690_100384 | SAMN05421690_1002125 | Nucleotide-binding universal stress protein, UspA family. | Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.402 |
SER59868.1 | SEQ90648.1 | SAMN05421690_104223 | SAMN05421690_100384 | methylated-DNA-[protein]-cysteine S-methyltransferase. | Nucleotide-binding universal stress protein, UspA family. | 0.407 |
SER74424.1 | SEQ90648.1 | SAMN05421690_10646 | SAMN05421690_100384 | Zn-dependent amino-or carboxypeptidase, M28 family. | Nucleotide-binding universal stress protein, UspA family. | 0.462 |
flhA | SEQ90648.1 | SAMN05421690_100446 | SAMN05421690_100384 | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | Nucleotide-binding universal stress protein, UspA family. | 0.401 |
secB | SEQ90648.1 | SAMN05421690_1002125 | SAMN05421690_100384 | Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | Nucleotide-binding universal stress protein, UspA family. | 0.402 |