STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER31839.1Protein of unknown function. (70 aa)    
Predicted Functional Partners:
SER31859.1
Hypothetical protein.
       0.700
SER29240.1
Hypothetical protein.
  
     0.595
SER06639.1
WD40-like Beta Propeller Repeat.
  
     0.556
SEQ85178.1
Protein of unknown function.
  
     0.537
SER37599.1
Hypothetical protein.
  
     0.522
SER26293.1
Glycosyl transferase family 2.
  
     0.504
SER20198.1
Hypothetical protein.
  
     0.496
SEQ76773.1
Uncharacterized conserved protein, DUF2141 family.
  
     0.469
SEQ79595.1
Hypothetical protein.
  
     0.453
SER25795.1
Ca2+-binding protein, RTX toxin-related.
  
     0.442
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.