STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER39977.1WD40-like Beta Propeller Repeat. (372 aa)    
Predicted Functional Partners:
SER24138.1
Outer membrane protein (porin).
  
 
 
 0.985
SER06639.1
WD40-like Beta Propeller Repeat.
 
 0.975
SER75263.1
Hypothetical protein.
    
 
 0.963
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.949
SER21575.1
Hypothetical protein.
  
 0.949
SER35697.1
OmpA-OmpF porin, OOP family.
  
 0.949
SER45795.1
Outer membrane protein OmpA.
  
 0.949
SER56522.1
Outer membrane protein OmpA.
  
 0.949
SER69681.1
Protein of unknown function.
  
 0.949
SER12277.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 0.932
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.