STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER69798.1Carboxypeptidase C (cathepsin A). (521 aa)    
Predicted Functional Partners:
SEQ75095.1
Acyl transferase domain-containing protein.
    
 
 0.556
SER09808.1
Ankyrin repeat.
    
 0.456
SER45768.1
Type II secretory pathway, component ExeA (predicted ATPase).
    
 0.456
SER62234.1
Ankyrin repeat.
    
 0.456
SER33936.1
Cytochrome P450.
  
 
 0.439
SER39977.1
WD40-like Beta Propeller Repeat.
  
  
 0.429
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.404
SER74424.1
Zn-dependent amino-or carboxypeptidase, M28 family.
   
  
 0.402
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.