Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ98623.1 | SER04642.1 | SAMN05421690_100516 | SAMN05421690_100688 | Cytochrome c oxidase subunit 2. | Dihydrolipoamide dehydrogenase. | 0.597 |
SEQ98623.1 | SER14920.1 | SAMN05421690_100516 | SAMN05421690_101010 | Cytochrome c oxidase subunit 2. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.642 |
SEQ98623.1 | SER42668.1 | SAMN05421690_100516 | SAMN05421690_10269 | Cytochrome c oxidase subunit 2. | Protein SCO1/2. | 0.860 |
SEQ98623.1 | SER46963.1 | SAMN05421690_100516 | SAMN05421690_102914 | Cytochrome c oxidase subunit 2. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.415 |
SEQ98623.1 | SER70843.1 | SAMN05421690_100516 | SAMN05421690_10575 | Cytochrome c oxidase subunit 2. | Peroxiredoxin. | 0.949 |
SER04642.1 | SEQ98623.1 | SAMN05421690_100688 | SAMN05421690_100516 | Dihydrolipoamide dehydrogenase. | Cytochrome c oxidase subunit 2. | 0.597 |
SER04642.1 | SER14920.1 | SAMN05421690_100688 | SAMN05421690_101010 | Dihydrolipoamide dehydrogenase. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.845 |
SER04642.1 | SER46963.1 | SAMN05421690_100688 | SAMN05421690_102914 | Dihydrolipoamide dehydrogenase. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.522 |
SER04642.1 | SER51235.1 | SAMN05421690_100688 | SAMN05421690_103313 | Dihydrolipoamide dehydrogenase. | Ribonucleoside-diphosphate reductase alpha chain; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.487 |
SER04642.1 | SER70360.1 | SAMN05421690_100688 | SAMN05421690_10567 | Dihydrolipoamide dehydrogenase. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.525 |
SER04642.1 | SER70843.1 | SAMN05421690_100688 | SAMN05421690_10575 | Dihydrolipoamide dehydrogenase. | Peroxiredoxin. | 0.937 |
SER04642.1 | msrB | SAMN05421690_100688 | SAMN05421690_10463 | Dihydrolipoamide dehydrogenase. | Peptide methionine sulfoxide reductase msrA/msrB. | 0.427 |
SER14920.1 | SEQ98623.1 | SAMN05421690_101010 | SAMN05421690_100516 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Cytochrome c oxidase subunit 2. | 0.642 |
SER14920.1 | SER04642.1 | SAMN05421690_101010 | SAMN05421690_100688 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Dihydrolipoamide dehydrogenase. | 0.845 |
SER14920.1 | SER51235.1 | SAMN05421690_101010 | SAMN05421690_103313 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Ribonucleoside-diphosphate reductase alpha chain; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.451 |
SER14920.1 | SER70843.1 | SAMN05421690_101010 | SAMN05421690_10575 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Peroxiredoxin. | 0.897 |
SER14920.1 | msrB | SAMN05421690_101010 | SAMN05421690_10463 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Peptide methionine sulfoxide reductase msrA/msrB. | 0.431 |
SER42668.1 | SEQ98623.1 | SAMN05421690_10269 | SAMN05421690_100516 | Protein SCO1/2. | Cytochrome c oxidase subunit 2. | 0.860 |
SER42668.1 | SER70843.1 | SAMN05421690_10269 | SAMN05421690_10575 | Protein SCO1/2. | Peroxiredoxin. | 0.881 |
SER46963.1 | SEQ98623.1 | SAMN05421690_102914 | SAMN05421690_100516 | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | Cytochrome c oxidase subunit 2. | 0.415 |
page 1 of 3